Rheinheimera riviphila strain KYPC3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera riviphila strain KYPC3 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is a key feature of its genetic makeup. The genomic data for Rheinheimera riviphila strain KYPC3 is accessible under the accession number SACS00000000.1. As a member of the Rheinheimera genus, this bacterium may have specific ecological roles, particularly in aquatic environments, where members of this genus are commonly found. The Gram-negative nature of Rheinheimera riviphila strain KYPC3 suggests that it possesses an outer membrane, which can contribute to its survival in various habitats by providing a barrier against certain environmental stressors. The single replicon indicates a streamlined genomic structure, which may influence the bacterium's metabolic capabilities and adaptability. Understanding the characteristics of Rheinheimera riviphila strain KYPC3 can provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities in freshwater ecosystems. This highlights the importance of studying such bacterial strains to understand their contributions to biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera riviphila
Strainstrain KYPC3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera riviphila strain KYPC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera riviphila strain KYPC3 NODE_115_length_200_cov_16,

Gene Summary

Adenine Count

1194577 bp

Thymine Count

1187677 bp

Guanine Count

1184602 bp

Cytosine Count

1180378 bp

Genome Length

4756064 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar motor protein pomaEOE67_11470Not AvailablePositive2634689 - 263545927738.4
flagellar motor protein motbEOE67_11475Not AvailablePositive2635468 - 263640934264.7
trna 4-thiouridine(8) synthase thiiEOE67_11480Not AvailablePositive2636594 - 263805754970.0
2-dehydropantoate 2-reductaseEOE67_11485Not AvailableNegative2638089 - 263902134113.3
vanz family proteinEOE67_11490Not AvailableNegative2639037 - 263939313467.0
yajq family cyclic di-gmp-binding proteinEOE67_11495Not AvailableNegative2639698 - 264018018385.1
tonb-dependent receptorEOE67_11500Not AvailablePositive2640730 - 264255067424.2
peptide-methionine (s)-s-oxide reductaseEOE67_11505Not AvailableNegative2643078 - 264361119719.3
fad-dependent oxidoreductaseEOE67_11510Not AvailablePositive2643793 - 264483637614.8
sdr family nad(p)-dependent oxidoreductaseEOE67_11515Not AvailablePositive2644833 - 264555226088.8

Displaying genes 2281 – 2290 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.