Rheinheimera riviphila strain KYPC3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera riviphila strain KYPC3 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is a key feature of its genetic makeup. The genomic data for Rheinheimera riviphila strain KYPC3 is accessible under the accession number SACS00000000.1. As a member of the Rheinheimera genus, this bacterium may have specific ecological roles, particularly in aquatic environments, where members of this genus are commonly found. The Gram-negative nature of Rheinheimera riviphila strain KYPC3 suggests that it possesses an outer membrane, which can contribute to its survival in various habitats by providing a barrier against certain environmental stressors. The single replicon indicates a streamlined genomic structure, which may influence the bacterium's metabolic capabilities and adaptability. Understanding the characteristics of Rheinheimera riviphila strain KYPC3 can provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities in freshwater ecosystems. This highlights the importance of studying such bacterial strains to understand their contributions to biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera riviphila
Strainstrain KYPC3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera riviphila strain KYPC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera riviphila strain KYPC3 NODE_115_length_200_cov_16,

Gene Summary

Adenine Count

1194577 bp

Thymine Count

1187677 bp

Guanine Count

1184602 bp

Cytosine Count

1180378 bp

Genome Length

4756064 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate racemaseEOE67_08045Not AvailableNegative1871262 - 187204728676.7
trna (uridine(54)-c5)-methyltransferase trmaEOE67_08050Not AvailablePositive1872220 - 187331441507.1
hth-type transcriptional repressor fabrEOE67_08055Not AvailableNegative1873304 - 187391222800.4
acyl-coa desaturaseEOE67_08060Not AvailablePositive1874010 - 187514944879.0
si-specific nad(p)(+) transhydrogenaseEOE67_08065Not AvailablePositive1875272 - 187669351749.8
tonb family proteinEOE67_08070Not AvailablePositive1876817 - 187817850424.7
uroporphyrinogen decarboxylaseEOE67_08075Not AvailableNegative1878268 - 187934140004.6
nad(+) diphosphataseEOE67_08080Not AvailableNegative1879584 - 188039030612.0
sigma d regulatorEOE67_08085Not AvailablePositive1880537 - 188102218020.8
fkbp-type peptidyl-prolyl cis-trans isomeraseEOE67_08090Not AvailableNegative1881138 - 188190827092.6

Displaying genes 1601 – 1610 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.