Rheinheimera riviphila strain KYPC3

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Chromatiaceae

Genus

Rheinheimera

Description

Rheinheimera riviphila strain KYPC3 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain is notable for having a single replicon, which is a key feature of its genetic makeup. The genomic data for Rheinheimera riviphila strain KYPC3 is accessible under the accession number SACS00000000.1. As a member of the Rheinheimera genus, this bacterium may have specific ecological roles, particularly in aquatic environments, where members of this genus are commonly found. The Gram-negative nature of Rheinheimera riviphila strain KYPC3 suggests that it possesses an outer membrane, which can contribute to its survival in various habitats by providing a barrier against certain environmental stressors. The single replicon indicates a streamlined genomic structure, which may influence the bacterium's metabolic capabilities and adaptability. Understanding the characteristics of Rheinheimera riviphila strain KYPC3 can provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities in freshwater ecosystems. This highlights the importance of studying such bacterial strains to understand their contributions to biodiversity and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyChromatiaceae
GenusRheinheimera
SpeciesRheinheimera riviphila
Strainstrain KYPC3

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Rheinheimera riviphila strain KYPC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rheinheimera riviphila strain KYPC3 NODE_115_length_200_cov_16,

Gene Summary

Adenine Count

1194577 bp

Thymine Count

1187677 bp

Guanine Count

1184602 bp

Cytosine Count

1180378 bp

Genome Length

4756064 bp

Protein-coding Genes

3965 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf440 family proteinEOE67_05990Not AvailablePositive1388705 - 138906413360.5
hypothetical proteinEOE67_05995Not AvailablePositive1389027 - 138977026346.3
hydrolaseEOE67_06000Not AvailablePositive1389770 - 139095143940.8
endonucleaseEOE67_06005Not AvailableNegative1390948 - 139175730048.1
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjEOE67_06010Not AvailableNegative1391768 - 139260731259.6
trna/rrna methyltransferaseEOE67_06015Not AvailablePositive1392791 - 139378035173.2
gaf domain-containing proteinEOE67_06020Not AvailablePositive1393833 - 139436019753.5
response regulatorEOE67_06025Not AvailablePositive1394488 - 1398978163885.0
two-component system response regulatorEOE67_06030Not AvailablePositive1399021 - 140016342184.2
superinfection immunity proteinEOE67_06035Not AvailableNegative1400192 - 14004469565.98

Displaying genes 1191 – 1200 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.