Rubrivivax rivuli strain KYPY4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Rubrivivax rivuli strain KYPY4 is characterized by a single replicon and is cataloged under the accession number SACR00000000.1. This strain is part of the genus Rubrivivax, which is known for its phototrophic capabilities, allowing it to harness light for energy, typically in aquatic environments. The single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. The biological and ecological insights into Rubrivivax rivuli strain KYPY4 suggest that its ability to thrive in light-rich environments provides it with a competitive advantage in diverse microbial communities. As a member of the broader ecosystem, it likely plays a significant role in nutrient cycling and energy flow, particularly in freshwater habitats. The single replicon may also reflect evolutionary adaptations that enhance its survival and functionality in such ecosystems. In summary, the unique genomic structure of Rubrivivax rivuli strain KYPY4, combined with its phototrophic nature, positions it as an important player in aquatic microbial communities, contributing to ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax rivuli
Strainstrain KYPY4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax rivuli strain KYPY4 NODE_32_length_223_cov_70, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin-type n-terminal cleavage/methylation domain-containing proteinEOE66_17475Not AvailableNegative3954326 - 395479916600.9
prepilin-type n-terminal cleavage/methylation domain-containing proteinEOE66_17480Not AvailableNegative3954915 - 395552921287.8
transcriptional repressor nrdrEOE66_17485Not AvailableNegative3955609 - 395605217095.7
serine hydroxymethyltransferaseEOE66_17490Not AvailableNegative3956076 - 395732644998.1
lytic transglycosylase domain-containing proteinEOE66_17495Not AvailableNegative3957568 - 395844031100.3
ubid family decarboxylaseEOE66_17500Not AvailablePositive3958717 - 396027056938.0
choline dehydrogenaseEOE66_17505Not AvailableNegative3960301 - 396189056659.7
abc transporter atp-binding proteinEOE66_17510Not AvailablePositive3962025 - 396389067832.8
hypothetical proteinEOE66_17515Not AvailableNegative3963877 - 396425112709.1
ygiq family radical sam proteinEOE66_17520Not AvailablePositive3964343 - 396670686960.1

Displaying genes 3461 – 3470 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.