Rubrivivax rivuli strain KYPY4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Rubrivivax rivuli strain KYPY4 is characterized by a single replicon and is cataloged under the accession number SACR00000000.1. This strain is part of the genus Rubrivivax, which is known for its phototrophic capabilities, allowing it to harness light for energy, typically in aquatic environments. The single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. The biological and ecological insights into Rubrivivax rivuli strain KYPY4 suggest that its ability to thrive in light-rich environments provides it with a competitive advantage in diverse microbial communities. As a member of the broader ecosystem, it likely plays a significant role in nutrient cycling and energy flow, particularly in freshwater habitats. The single replicon may also reflect evolutionary adaptations that enhance its survival and functionality in such ecosystems. In summary, the unique genomic structure of Rubrivivax rivuli strain KYPY4, combined with its phototrophic nature, positions it as an important player in aquatic microbial communities, contributing to ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax rivuli
Strainstrain KYPY4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax rivuli strain KYPY4 NODE_32_length_223_cov_70, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerophosphodiester phosphodiesteraseEOE66_16715Not AvailableNegative3772292 - 377304726517.8
duf3683 domain-containing proteinEOE66_16720Not AvailablePositive3773218 - 3777228146723.0
duf971 domain-containing proteinEOE66_16725Not AvailablePositive3777236 - 377764314708.1
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieEOE66_16730Not AvailablePositive3777661 - 377839226556.3
tim44 domain-containing proteinEOE66_16735Not AvailablePositive3778386 - 377883216824.3
peptidyl-prolyl cis-trans isomerase, epsd familyEOE66_16740Not AvailablePositive3779088 - 378005335289.5
polysaccharide export protein epseEOE66_16745Not AvailablePositive3780068 - 378089529316.6
chain length determinant protein epsfEOE66_16750Not AvailablePositive3780915 - 378234551928.4
polysaccharide biosynthesis tyrosine autokinaseEOE66_16755Not AvailablePositive3782345 - 378328032957.5
exosortase bEOE66_16760Not AvailablePositive3783297 - 378419932123.4

Displaying genes 3311 – 3320 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.