Rubrivivax rivuli strain KYPY4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Rubrivivax rivuli strain KYPY4 is characterized by a single replicon and is cataloged under the accession number SACR00000000.1. This strain is part of the genus Rubrivivax, which is known for its phototrophic capabilities, allowing it to harness light for energy, typically in aquatic environments. The single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. The biological and ecological insights into Rubrivivax rivuli strain KYPY4 suggest that its ability to thrive in light-rich environments provides it with a competitive advantage in diverse microbial communities. As a member of the broader ecosystem, it likely plays a significant role in nutrient cycling and energy flow, particularly in freshwater habitats. The single replicon may also reflect evolutionary adaptations that enhance its survival and functionality in such ecosystems. In summary, the unique genomic structure of Rubrivivax rivuli strain KYPY4, combined with its phototrophic nature, positions it as an important player in aquatic microbial communities, contributing to ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax rivuli
Strainstrain KYPY4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax rivuli strain KYPY4 NODE_32_length_223_cov_70, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitEOE66_15860Not AvailableNegative3593399 - 3596554112165.0
efflux rnd transporter periplasmic adaptor subunitEOE66_15865Not AvailableNegative3596575 - 359783142532.1
hamp domain-containing proteinEOE66_15870Not AvailablePositive3597945 - 359934250862.0
response regulatorEOE66_15875Not AvailablePositive3599356 - 360004825341.5
cold-shock proteinEOE66_15880Not AvailableNegative3600075 - 36003359184.69
atp-dependent clp protease adapter clpsEOE66_15885Not AvailablePositive3600613 - 360097513227.1
atp-dependent clp protease atp-binding subunit clpaEOE66_15890Not AvailablePositive3600972 - 360328484347.4
zinc-dependent peptidaseEOE66_15895Not AvailableNegative3603291 - 360411230332.1
udp-2,3-diacylglucosamine diphosphataseEOE66_15900Not AvailableNegative3604120 - 360491129175.7
peptidyl-prolyl cis-trans isomeraseEOE66_15905Not AvailableNegative3604926 - 360542918237.6

Displaying genes 3141 – 3150 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.