Rubrivivax rivuli strain KYPY4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Rubrivivax rivuli strain KYPY4 is characterized by a single replicon and is cataloged under the accession number SACR00000000.1. This strain is part of the genus Rubrivivax, which is known for its phototrophic capabilities, allowing it to harness light for energy, typically in aquatic environments. The single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. The biological and ecological insights into Rubrivivax rivuli strain KYPY4 suggest that its ability to thrive in light-rich environments provides it with a competitive advantage in diverse microbial communities. As a member of the broader ecosystem, it likely plays a significant role in nutrient cycling and energy flow, particularly in freshwater habitats. The single replicon may also reflect evolutionary adaptations that enhance its survival and functionality in such ecosystems. In summary, the unique genomic structure of Rubrivivax rivuli strain KYPY4, combined with its phototrophic nature, positions it as an important player in aquatic microbial communities, contributing to ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax rivuli
Strainstrain KYPY4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax rivuli strain KYPY4 NODE_32_length_223_cov_70, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine-protein phosphataseEOE66_12505Not AvailablePositive2853617 - 285437827533.5
duf4280 domain-containing proteinEOE66_12510Not AvailablePositive2854419 - 285480512933.2
ompa family proteinEOE66_12515Not AvailableNegative2854883 - 285542818853.8
type vi secretion system baseplate subunit tsskEOE66_12520Not AvailablePositive2855740 - 285707749652.2
dotu family type vi secretion system proteinEOE66_12525Not AvailablePositive2857122 - 285845646901.0
type vi secretion system membrane subunit tssmEOE66_12530Not AvailablePositive2858458 - 2861970126901.0
type vi secretion system-associated protein tagfEOE66_12535Not AvailablePositive2861984 - 286273026329.4
duf4384 domain-containing proteinEOE66_12540Not AvailablePositive2862762 - 286474769835.8
transcription elongation factor grebEOE66_12545Not AvailablePositive2864744 - 286529820352.0
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseEOE66_12550Not AvailableNegative2865315 - 286760384750.6

Displaying genes 2491 – 2500 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.