Rubrivivax rivuli strain KYPY4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Rubrivivax

Description

Rubrivivax rivuli strain KYPY4 is characterized by a single replicon and is cataloged under the accession number SACR00000000.1. This strain is part of the genus Rubrivivax, which is known for its phototrophic capabilities, allowing it to harness light for energy, typically in aquatic environments. The single replicon indicates a streamlined genomic organization, which may contribute to its adaptability and efficiency in nutrient utilization within its ecological niche. The biological and ecological insights into Rubrivivax rivuli strain KYPY4 suggest that its ability to thrive in light-rich environments provides it with a competitive advantage in diverse microbial communities. As a member of the broader ecosystem, it likely plays a significant role in nutrient cycling and energy flow, particularly in freshwater habitats. The single replicon may also reflect evolutionary adaptations that enhance its survival and functionality in such ecosystems. In summary, the unique genomic structure of Rubrivivax rivuli strain KYPY4, combined with its phototrophic nature, positions it as an important player in aquatic microbial communities, contributing to ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusRubrivivax
SpeciesRubrivivax rivuli
Strainstrain KYPY4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivivax rivuli strain KYPY4 NODE_32_length_223_cov_70, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseEOE66_06665Not AvailablePositive1528242 - 152879920627.7
3-dehydroquinate synthaseEOE66_06670Not AvailablePositive1528863 - 152998139413.5
deoxyguanosinetriphosphate triphosphohydrolaseEOE66_06675Not AvailablePositive1529978 - 153112642770.9
transposaseEOE66_06680Not AvailablePositive1531152 - 153185024656.4
glutamate synthase subunit alphaEOE66_06685Not AvailablePositive1532081 - 1536796171131.0
glutamate synthase subunit betaEOE66_06690Not AvailablePositive1536842 - 153830852878.9
pilus assembly protein pileEOE66_06695Not AvailablePositive1538569 - 153896113905.3
prepilin-type n-terminal cleavage/methylation domain-containing proteinEOE66_06700Not AvailablePositive1538955 - 153948818441.0
type iv pilus modification protein pilvEOE66_06705Not AvailablePositive1539482 - 153998217567.5
prepilin-type n-terminal cleavage/methylation domain-containing proteinEOE66_06710Not AvailablePositive1539979 - 154120541460.3

Displaying genes 1341 – 1350 of 4287 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.