Neptunomonas marina strain HPM-16

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Neptunomonas

Description

Neptunomonas marina strain HPM-16 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability in various environments. Its genetic information is accessible under the accession number SACQ00000000.1. The classification of N. marina strain HPM-16 within the Neptunomonas genus indicates its potential role in marine ecosystems. As a member of this genus, it is likely involved in biogeochemical processes in oceanic environments, although specific ecological roles are not detailed in the provided information. The rod shape may confer certain advantages in nutrient uptake and motility in aquatic settings, which can facilitate its survival and interaction with other microorganisms. Overall, the traits of Neptunomonas marina strain HPM-16 suggest that it is a well-adapted organism for life in marine habitats, although further research would be necessary to elucidate its specific functions and interactions within microbial communities. Its genomic simplicity, indicated by the presence of a single replicon, might also provide insights into evolutionary strategies for survival in fluctuating marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNeptunomonas
SpeciesNeptunomonas marina
Strainstrain HPM-16

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neptunomonas marina strain HPM-16 NODE_50_length_204_cov_104,

Gene Summary

Adenine Count

906387 bp

Thymine Count

917106 bp

Guanine Count

945690 bp

Cytosine Count

912818 bp

Genome Length

3685782 bp

Protein-coding Genes

3460 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdEOE65_00075Not AvailablePositive14943 - 1550020566.1
abc transporter atp-binding proteinEOE65_00080Not AvailableNegative15497 - 1657038629.7
iron abc transporter permeaseEOE65_00085Not AvailableNegative16578 - 1823659768.6
fe(3+) abc transporter substrate-binding proteinEOE65_00090Not AvailableNegative18322 - 1935937570.5
sterol desaturase family proteinEOE65_00095Not AvailableNegative19415 - 2042538262.2
duf4856 domain-containing proteinEOE65_00100Not AvailableNegative20474 - 2183249022.8
16s rrna (uracil(1498)-n(3))-methyltransferaseEOE65_00105Not AvailableNegative22051 - 2276726615.4
mate family efflux transporterEOE65_00110Not AvailablePositive22870 - 2421648275.6
acetoacetyl-coa reductaseEOE65_00115Not AvailablePositive24396 - 2514526497.7
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive27819 - 27915Not Available

Displaying genes 71 – 80 of 3566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.