Neptunomonas marina strain HPM-16

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Neptunomonas

Description

Neptunomonas marina strain HPM-16 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability in various environments. Its genetic information is accessible under the accession number SACQ00000000.1. The classification of N. marina strain HPM-16 within the Neptunomonas genus indicates its potential role in marine ecosystems. As a member of this genus, it is likely involved in biogeochemical processes in oceanic environments, although specific ecological roles are not detailed in the provided information. The rod shape may confer certain advantages in nutrient uptake and motility in aquatic settings, which can facilitate its survival and interaction with other microorganisms. Overall, the traits of Neptunomonas marina strain HPM-16 suggest that it is a well-adapted organism for life in marine habitats, although further research would be necessary to elucidate its specific functions and interactions within microbial communities. Its genomic simplicity, indicated by the presence of a single replicon, might also provide insights into evolutionary strategies for survival in fluctuating marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNeptunomonas
SpeciesNeptunomonas marina
Strainstrain HPM-16

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neptunomonas marina strain HPM-16 NODE_50_length_204_cov_104,

Gene Summary

Adenine Count

906387 bp

Thymine Count

917106 bp

Guanine Count

945690 bp

Cytosine Count

912818 bp

Genome Length

3685782 bp

Protein-coding Genes

3460 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iii subunit epsilonEOE65_17585Not AvailableNegative3620031 - 362073225984.7
ribonuclease hiEOE65_17590Not AvailableNegative3620735 - 362117816390.4
sam-dependent methyltransferaseEOE65_17595Not AvailableNegative3621165 - 362194429092.2
hydroxyacylglutathione hydrolaseEOE65_17600Not AvailablePositive3622040 - 362281628239.1
lysm peptidoglycan-binding domain-containing proteinEOE65_17605Not AvailablePositive3622839 - 362444059803.0
hypothetical proteinEOE65_17610Not AvailablePositive3624450 - 36246929315.21
abc transporter substrate-binding proteinEOE65_17615Not AvailablePositive3624783 - 362659468606.2
microcin c abc transporter permease yejbEOE65_17620Not AvailablePositive3626594 - 362767339556.7
abc transporter permeaseEOE65_17625Not AvailablePositive3627679 - 362873439271.2
abc transporter atp-binding proteinEOE65_17630Not AvailablePositive3628731 - 363032358593.0

Displaying genes 3491 – 3500 of 3566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.