Neptunomonas marina strain HPM-16

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Neptunomonas

Description

Neptunomonas marina strain HPM-16 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability in various environments. Its genetic information is accessible under the accession number SACQ00000000.1. The classification of N. marina strain HPM-16 within the Neptunomonas genus indicates its potential role in marine ecosystems. As a member of this genus, it is likely involved in biogeochemical processes in oceanic environments, although specific ecological roles are not detailed in the provided information. The rod shape may confer certain advantages in nutrient uptake and motility in aquatic settings, which can facilitate its survival and interaction with other microorganisms. Overall, the traits of Neptunomonas marina strain HPM-16 suggest that it is a well-adapted organism for life in marine habitats, although further research would be necessary to elucidate its specific functions and interactions within microbial communities. Its genomic simplicity, indicated by the presence of a single replicon, might also provide insights into evolutionary strategies for survival in fluctuating marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNeptunomonas
SpeciesNeptunomonas marina
Strainstrain HPM-16

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neptunomonas marina strain HPM-16 NODE_50_length_204_cov_104,

Gene Summary

Adenine Count

906387 bp

Thymine Count

917106 bp

Guanine Count

945690 bp

Cytosine Count

912818 bp

Genome Length

3685782 bp

Protein-coding Genes

3460 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prephenate dehydrataseEOE65_12380Not AvailablePositive2584058 - 258515840375.8
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferaseEOE65_12385Not AvailablePositive2585211 - 258743378724.7
(d)cmp kinaseEOE65_12390Not AvailablePositive2587420 - 258811524532.2
30s ribosomal protein s1EOE65_12395Not AvailablePositive2588149 - 258983461680.4
integration host factor subunit betaEOE65_12400Not AvailablePositive2589904 - 259020011090.2
lapa family proteinEOE65_12405Not AvailablePositive2590226 - 259053111128.3
lipopolysaccharide assembly protein lapbEOE65_12410Not AvailablePositive2590534 - 259171544589.5
orotidine-5'-phosphate decarboxylaseEOE65_12415Not AvailablePositive2591738 - 259246326462.0
rok family proteinEOE65_12420Not AvailableNegative2592460 - 259334131598.6
aec family transporterEOE65_12425Not AvailableNegative2593345 - 259423832228.7

Displaying genes 2461 – 2470 of 3566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.