Neptunomonas marina strain HPM-16

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Neptunomonas

Description

Neptunomonas marina strain HPM-16 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability in various environments. Its genetic information is accessible under the accession number SACQ00000000.1. The classification of N. marina strain HPM-16 within the Neptunomonas genus indicates its potential role in marine ecosystems. As a member of this genus, it is likely involved in biogeochemical processes in oceanic environments, although specific ecological roles are not detailed in the provided information. The rod shape may confer certain advantages in nutrient uptake and motility in aquatic settings, which can facilitate its survival and interaction with other microorganisms. Overall, the traits of Neptunomonas marina strain HPM-16 suggest that it is a well-adapted organism for life in marine habitats, although further research would be necessary to elucidate its specific functions and interactions within microbial communities. Its genomic simplicity, indicated by the presence of a single replicon, might also provide insights into evolutionary strategies for survival in fluctuating marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNeptunomonas
SpeciesNeptunomonas marina
Strainstrain HPM-16

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neptunomonas marina strain HPM-16 NODE_50_length_204_cov_104,

Gene Summary

Adenine Count

906387 bp

Thymine Count

917106 bp

Guanine Count

945690 bp

Cytosine Count

912818 bp

Genome Length

3685782 bp

Protein-coding Genes

3460 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding cassette domain-containing proteinEOE65_07860Not AvailableNegative1634872 - 163649759271.3
thiol reductant abc exporter subunit cyddEOE65_07865Not AvailableNegative1636494 - 163815860238.6
sigma-54-dependent fis family transcriptional regulatorEOE65_07870Not AvailablePositive1638259 - 163957548889.4
cytochrome bd-i oxidase subunit cydxEOE65_07875Not AvailableNegative1639632 - 16397303720.52
cytochrome d ubiquinol oxidase subunit iiEOE65_07880Not AvailableNegative1639747 - 164088341636.2
cytochrome bd-i ubiquinol oxidase subunit cydaEOE65_07885Not AvailableNegative1640876 - 164245058683.5
nad(p)/fad-dependent oxidoreductaseEOE65_07890Not AvailableNegative1642663 - 164397647744.9
hpp family proteinEOE65_07895Not AvailableNegative1644231 - 164468315390.6
tetr/acrr family transcriptional regulatorEOE65_07900Not AvailablePositive1644775 - 164537121837.0
polyamine aminopropyltransferaseEOE65_07905Not AvailableNegative1645368 - 164622231882.8

Displaying genes 1571 – 1580 of 3566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.