Neptunomonas marina strain HPM-16

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Neptunomonas

Description

Neptunomonas marina strain HPM-16 is a Gram-negative, rod-shaped bacterium. This species is characterized by having a single replicon, which suggests a streamlined genomic organization that may contribute to its adaptability in various environments. Its genetic information is accessible under the accession number SACQ00000000.1. The classification of N. marina strain HPM-16 within the Neptunomonas genus indicates its potential role in marine ecosystems. As a member of this genus, it is likely involved in biogeochemical processes in oceanic environments, although specific ecological roles are not detailed in the provided information. The rod shape may confer certain advantages in nutrient uptake and motility in aquatic settings, which can facilitate its survival and interaction with other microorganisms. Overall, the traits of Neptunomonas marina strain HPM-16 suggest that it is a well-adapted organism for life in marine habitats, although further research would be necessary to elucidate its specific functions and interactions within microbial communities. Its genomic simplicity, indicated by the presence of a single replicon, might also provide insights into evolutionary strategies for survival in fluctuating marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNeptunomonas
SpeciesNeptunomonas marina
Strainstrain HPM-16

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neptunomonas marina strain HPM-16 NODE_50_length_204_cov_104,

Gene Summary

Adenine Count

906387 bp

Thymine Count

917106 bp

Guanine Count

945690 bp

Cytosine Count

912818 bp

Genome Length

3685782 bp

Protein-coding Genes

3460 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-binding proteinEOE65_06955Not AvailableNegative1458508 - 146085686823.8
shikimate dehydrogenaseEOE65_06960Not AvailableNegative1460970 - 146178228579.2
oxygen-dependent coproporphyrinogen oxidaseEOE65_06965Not AvailableNegative1461782 - 146269934849.6
trna threonylcarbamoyladenosine biosynthesis protein rimnEOE65_06970Not AvailableNegative1462744 - 146330420065.7
dna-protecting protein dpraEOE65_06975Not AvailableNegative1463362 - 146446839203.8
lysm domain-containing proteinEOE65_06980Not AvailableNegative1464477 - 146551438738.6
peptide deformylaseEOE65_06985Not AvailablePositive1465677 - 146618919314.1
methionyl-trna formyltransferaseEOE65_06990Not AvailablePositive1466258 - 146721433931.6
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbEOE65_06995Not AvailablePositive1467211 - 146851548643.3
trk system potassium transporter trkaEOE65_07000Not AvailablePositive1468519 - 146989550232.8

Displaying genes 1391 – 1400 of 3566 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.