Novosphingobium umbonatum strain FSY-9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium umbonatum strain FSY-9 is characterized by the presence of flagella, which suggests a motile lifestyle that may enhance its ability to navigate through various environments. This motility can potentially contribute to its ecological roles, such as colonization and interaction with other microorganisms or substrates. The strain is noted to possess a single replicon, indicating a streamlined genomic organization that may reflect its adaptation to specific ecological niches or environmental conditions. The genomic information for Novosphingobium umbonatum strain FSY-9 is accessible under the accession SACO00000000.1, providing a basis for further research into its genetic and metabolic capabilities. The presence of flagella along with a single replicon suggests that this strain may have evolved efficient mechanisms for survival and adaptation in its environment. Understanding these traits can provide insights into the ecological roles of Novosphingobium umbonatum strain FSY-9, particularly in terms of its interactions with other microorganisms and its potential applications in bioremediation or other ecological engineering efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium umbonatum
Strainstrain FSY-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium umbonatum strain FSY-9 NODE_91_length_230_cov_254,

Gene Summary

Adenine Count

791607 bp

Thymine Count

784912 bp

Guanine Count

1248920 bp

Cytosine Count

1263933 bp

Genome Length

4095691 bp

Protein-coding Genes

3532 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-methylcytosine-specific restriction endonuclease system specificity protein mcrcEOE18_17395Not AvailablePositive3896133 - 389720940096.5
is1182 family transposaseEOE18_17400Not AvailablePositive3897278 - 389871753809.6
addiction module toxin releEOE18_17405Not AvailablePositive3899009 - 389935012171.8
helix-turn-helix domain-containing proteinEOE18_17410Not AvailablePositive3899347 - 389963410003.2
sigma-70 family rna polymerase sigma factorEOE18_17415Not AvailablePositive3900323 - 390081419616.3
duf4880 domain-containing proteinEOE18_17420Not AvailablePositive3900790 - 390176734961.4
hypothetical proteinEOE18_17425Not AvailablePositive3901859 - 3905053112850.0
pepsy domain-containing proteinEOE18_17430Not AvailablePositive3905094 - 390641648736.2
2fe-2s iron-sulfur cluster binding domain-containing proteinEOE18_17435Not AvailablePositive3906457 - 390677711202.1
glycoside hydrolase family 2EOE18_17440Not AvailableNegative3906819 - 3909716105666.0

Displaying genes 3451 – 3460 of 3634 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.