Novosphingobium umbonatum strain FSY-9

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium umbonatum strain FSY-9 is characterized by the presence of flagella, which suggests a motile lifestyle that may enhance its ability to navigate through various environments. This motility can potentially contribute to its ecological roles, such as colonization and interaction with other microorganisms or substrates. The strain is noted to possess a single replicon, indicating a streamlined genomic organization that may reflect its adaptation to specific ecological niches or environmental conditions. The genomic information for Novosphingobium umbonatum strain FSY-9 is accessible under the accession SACO00000000.1, providing a basis for further research into its genetic and metabolic capabilities. The presence of flagella along with a single replicon suggests that this strain may have evolved efficient mechanisms for survival and adaptation in its environment. Understanding these traits can provide insights into the ecological roles of Novosphingobium umbonatum strain FSY-9, particularly in terms of its interactions with other microorganisms and its potential applications in bioremediation or other ecological engineering efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium umbonatum
Strainstrain FSY-9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium umbonatum strain FSY-9 NODE_91_length_230_cov_254,

Gene Summary

Adenine Count

791607 bp

Thymine Count

784912 bp

Guanine Count

1248920 bp

Cytosine Count

1263933 bp

Genome Length

4095691 bp

Protein-coding Genes

3532 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein tranEOE18_16460Not AvailablePositive3663475 - 366537365994.7
conjugal transfer protein trafEOE18_16465Not AvailablePositive3665357 - 366630734773.3
pilus assembly proteinEOE18_16470Not AvailablePositive3666307 - 366773750941.4
dead/deah box helicaseEOE18_16485Not AvailableNegative3670961 - 367315679918.8
atp-binding proteinEOE18_16490Not AvailableNegative3673153 - 367445748030.4
hypothetical proteinEOE18_16495Not AvailableNegative3674457 - 367676384140.8
class i sam-dependent dna methyltransferaseEOE18_16500Not AvailablePositive3677027 - 3679807103612.0
type ii toxin-antitoxin system relb/dinj family antitoxinEOE18_16505Not AvailablePositive3679904 - 36801649521.51
type ii toxin-antitoxin system yafq family toxinEOE18_16510Not AvailablePositive3680148 - 368046811875.2
dead/deah box helicaseEOE18_16515Not AvailablePositive3680465 - 368253175664.0

Displaying genes 3271 – 3280 of 3634 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.