Rhodobacteraceae bacterium CCMM004

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium CCMM004 is a member of the Rhodobacteraceae family, which is known for its diverse metabolic capabilities and ecological significance. This bacterium is characterized by having a single replicon, which indicates a simplified genomic structure that may facilitate efficient replication and metabolic regulation. The genomic data for Rhodobacteraceae bacterium CCMM004 is represented by the accession number RZWH00000000.1, providing a reference for further studies on its genetic makeup and biological functions. While specific metabolic pathways and ecological interactions are not detailed in the provided traits, members of the Rhodobacteraceae family are typically associated with various environments, including marine and freshwater ecosystems, where they play crucial roles in carbon cycling and the degradation of organic matter. The presence of only one replicon in Rhodobacteraceae bacterium CCMM004 may suggest a streamlined adaptation to its ecological niche, potentially allowing it to respond effectively to environmental changes. This characteristic could also imply a focus on specific metabolic pathways that are advantageous in its habitat. Overall, understanding the traits of Rhodobacteraceae bacterium CCMM004 may provide insights into the ecological roles of bacteria within the Rhodobacteraceae family and their contributions to nutrient cycling and ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium CCMM004


Gene Summary

Adenine Count

669901 bp

Thymine Count

670431 bp

Guanine Count

1509231 bp

Cytosine Count

1535028 bp

Genome Length

4385641 bp

Protein-coding Genes

4120 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrogenase expression/formation proteinDXV76_13345Not AvailableNegative2780519 - 278135829167.9
hydrogenase accessory proteinDXV76_13350Not AvailableNegative2781370 - 278174713573.2
hypc/hybg/hupf family hydrogenase formation chaperoneDXV76_13355Not AvailableNegative2781747 - 278205810906.1
hyad/hybd family hydrogenase maturation endopeptidaseDXV76_13360Not AvailableNegative2782063 - 278271022662.0
ni/fe-hydrogenase, b-type cytochrome subunitDXV76_13365Not AvailableNegative2782962 - 278371428343.9
nickel-dependent hydrogenase large subunitDXV76_13370Not AvailableNegative2783726 - 278551966375.7
twin-arginine translocation signal domain-containing proteinDXV76_13375Not AvailableNegative2785523 - 278662339970.9
carbamoyltransferase hypfDXV76_13380Not AvailableNegative2786931 - 278916277586.0
hupv proteinDXV76_13385Not AvailableNegative2789290 - 279071750462.4
hupu proteinDXV76_13390Not AvailableNegative2790717 - 279171234661.7

Displaying genes 2641 – 2650 of 4186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.