Labedella populi strain 8H24J-4-2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella populi strain 8H24J-4-2 is a Gram-positive, rod-shaped bacterium. It is notable for having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RZNC00000000.1, which serves as a reference for its genetic information. The Gram-positive nature of Labedella populi suggests that it possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group of bacteria. This structural feature can influence its physiological traits, including resistance to certain environmental stresses and potentially to antibiotic treatment. In terms of ecological insight, the classification of Labedella populi indicates a potential association with poplar trees, as suggested by its name. This relationship may imply a role in the microbiome of these trees, possibly affecting nutrient cycling or plant health. The specific adaptations and metabolic capabilities of Labedella populi, although not detailed here, could contribute to its ecological niche and interactions within its environment. Understanding these traits may provide further insights into the ecological dynamics of forest ecosystems where poplar trees are prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella populi
Strainstrain 8H24J-4-2

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella populi strain 8H24J-4-2 scaffold_14, whole genome

Gene Summary

Adenine Count

532309 bp

Thymine Count

531264 bp

Guanine Count

1176481 bp

Cytosine Count

1177835 bp

Genome Length

3418961 bp

Protein-coding Genes

3116 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smc-scp complex subunit scpbELQ92_03365Not AvailablePositive671170 - 67178722080.1
rrna pseudouridine synthaseELQ92_03370Not AvailablePositive671777 - 67262229762.3
prephenate dehydrogenaseELQ92_03375Not AvailablePositive672619 - 67372538807.6
(d)cmp kinaseELQ92_03380Not AvailablePositive673730 - 67441023888.0
ribosome biogenesis gtpase derELQ92_03385Not AvailablePositive674403 - 67591755828.2
qace family quaternary ammonium compound efflux smr transporterELQ92_03390Not AvailableNegative676150 - 67650911992.9
qace family quaternary ammonium compound efflux smr transporterELQ92_03395Not AvailableNegative676506 - 67685311661.8
fad-dependent oxidoreductaseELQ92_03400Not AvailablePositive676992 - 67813739900.6
2'-5' rna ligase family proteinELQ92_03405Not AvailableNegative678165 - 67866517355.9
aaa family atpaseELQ92_03410Not AvailablePositive678783 - 68094579738.4

Displaying genes 651 – 660 of 3167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.