Labedella populi strain 8H24J-4-2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella populi strain 8H24J-4-2 is a Gram-positive, rod-shaped bacterium. It is notable for having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RZNC00000000.1, which serves as a reference for its genetic information. The Gram-positive nature of Labedella populi suggests that it possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group of bacteria. This structural feature can influence its physiological traits, including resistance to certain environmental stresses and potentially to antibiotic treatment. In terms of ecological insight, the classification of Labedella populi indicates a potential association with poplar trees, as suggested by its name. This relationship may imply a role in the microbiome of these trees, possibly affecting nutrient cycling or plant health. The specific adaptations and metabolic capabilities of Labedella populi, although not detailed here, could contribute to its ecological niche and interactions within its environment. Understanding these traits may provide further insights into the ecological dynamics of forest ecosystems where poplar trees are prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella populi
Strainstrain 8H24J-4-2

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella populi strain 8H24J-4-2 scaffold_14, whole genome

Gene Summary

Adenine Count

532309 bp

Thymine Count

531264 bp

Guanine Count

1176481 bp

Cytosine Count

1177835 bp

Genome Length

3418961 bp

Protein-coding Genes

3116 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterELQ92_02015Not AvailableNegative402483 - 40390450637.9
marr family transcriptional regulatorELQ92_02020Not AvailableNegative403901 - 40432615660.6
alpha/beta hydrolaseELQ92_02025Not AvailablePositive404475 - 40531730245.0
tetr family transcriptional regulatorELQ92_02030Not AvailableNegative405344 - 40619831405.6
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeELQ92_02035Not AvailablePositive406125 - 40737543840.8
abc transporter substrate-binding proteinELQ92_02040Not AvailablePositive407472 - 40908856984.9
abc transporter permeaseELQ92_02045Not AvailablePositive409161 - 41017436271.9
abc transporter permeaseELQ92_02050Not AvailablePositive410249 - 41104628042.0
abc transporter atp-binding proteinELQ92_02055Not AvailableNegative411197 - 41287059526.4
aldo/keto reductaseELQ92_02060Not AvailablePositive413038 - 41386230338.9

Displaying genes 391 – 400 of 3167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.