Labedella populi strain 8H24J-4-2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella populi strain 8H24J-4-2 is a Gram-positive, rod-shaped bacterium. It is notable for having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RZNC00000000.1, which serves as a reference for its genetic information. The Gram-positive nature of Labedella populi suggests that it possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group of bacteria. This structural feature can influence its physiological traits, including resistance to certain environmental stresses and potentially to antibiotic treatment. In terms of ecological insight, the classification of Labedella populi indicates a potential association with poplar trees, as suggested by its name. This relationship may imply a role in the microbiome of these trees, possibly affecting nutrient cycling or plant health. The specific adaptations and metabolic capabilities of Labedella populi, although not detailed here, could contribute to its ecological niche and interactions within its environment. Understanding these traits may provide further insights into the ecological dynamics of forest ecosystems where poplar trees are prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella populi
Strainstrain 8H24J-4-2

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella populi strain 8H24J-4-2 scaffold_14, whole genome

Gene Summary

Adenine Count

532309 bp

Thymine Count

531264 bp

Guanine Count

1176481 bp

Cytosine Count

1177835 bp

Genome Length

3418961 bp

Protein-coding Genes

3116 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate synthaseELQ92_10405Not AvailableNegative2205039 - 220626843078.2
shikimate dehydrogenaseELQ92_10410Not AvailableNegative2206324 - 220726832213.2
endolytic transglycosylase mltgELQ92_10415Not AvailableNegative2207210 - 220860449019.5
holliday junction resolvase ruvxELQ92_10420Not AvailableNegative2208597 - 220910617775.1
alanine--trna ligaseELQ92_10425Not AvailableNegative2209110 - 221176795079.2
hypothetical proteinELQ92_10430Not AvailableNegative2211831 - 22120648604.08
30s ribosomal protein s4ELQ92_10435Not AvailableNegative2212249 - 221287823695.9
replication-associated recombination protein aELQ92_10440Not AvailableNegative2213148 - 221448847504.6
peptidylprolyl isomeraseELQ92_10445Not AvailablePositive2214627 - 221542127023.3
duf349 domain-containing proteinELQ92_10450Not AvailablePositive2215512 - 221674745656.2

Displaying genes 2041 – 2050 of 3167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.