Labedella populi strain 8H24J-4-2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella populi strain 8H24J-4-2 is a Gram-positive, rod-shaped bacterium. It is notable for having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RZNC00000000.1, which serves as a reference for its genetic information. The Gram-positive nature of Labedella populi suggests that it possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group of bacteria. This structural feature can influence its physiological traits, including resistance to certain environmental stresses and potentially to antibiotic treatment. In terms of ecological insight, the classification of Labedella populi indicates a potential association with poplar trees, as suggested by its name. This relationship may imply a role in the microbiome of these trees, possibly affecting nutrient cycling or plant health. The specific adaptations and metabolic capabilities of Labedella populi, although not detailed here, could contribute to its ecological niche and interactions within its environment. Understanding these traits may provide further insights into the ecological dynamics of forest ecosystems where poplar trees are prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella populi
Strainstrain 8H24J-4-2

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella populi strain 8H24J-4-2 scaffold_14, whole genome

Gene Summary

Adenine Count

532309 bp

Thymine Count

531264 bp

Guanine Count

1176481 bp

Cytosine Count

1177835 bp

Genome Length

3418961 bp

Protein-coding Genes

3116 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine recombinase xercELQ92_08940Not AvailablePositive1897994 - 189892333585.7
m23 family metallopeptidaseELQ92_08945Not AvailableNegative1898970 - 189983330513.7
30s ribosomal protein s2ELQ92_08950Not AvailablePositive1899903 - 190088035812.1
elongation factor tsELQ92_08955Not AvailablePositive1900903 - 190173029261.7
ump kinaseELQ92_08960Not AvailablePositive1901844 - 190255725159.4
ribosome recycling factorELQ92_08965Not AvailablePositive1902592 - 190314620528.4
phosphatidate cytidylyltransferaseELQ92_08970Not AvailablePositive1903293 - 190419832003.4
diviva domain-containing proteinELQ92_08975Not AvailablePositive1904195 - 190480322447.3
hypothetical proteinELQ92_08985Not AvailablePositive1905982 - 19062098367.93
alpha/beta fold hydrolaseELQ92_08990Not AvailablePositive1906235 - 190695725746.7

Displaying genes 1751 – 1760 of 3167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.