Labedella populi strain 8H24J-4-2

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella populi strain 8H24J-4-2 is a Gram-positive, rod-shaped bacterium. It is notable for having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number RZNC00000000.1, which serves as a reference for its genetic information. The Gram-positive nature of Labedella populi suggests that it possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group of bacteria. This structural feature can influence its physiological traits, including resistance to certain environmental stresses and potentially to antibiotic treatment. In terms of ecological insight, the classification of Labedella populi indicates a potential association with poplar trees, as suggested by its name. This relationship may imply a role in the microbiome of these trees, possibly affecting nutrient cycling or plant health. The specific adaptations and metabolic capabilities of Labedella populi, although not detailed here, could contribute to its ecological niche and interactions within its environment. Understanding these traits may provide further insights into the ecological dynamics of forest ecosystems where poplar trees are prevalent.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella populi
Strainstrain 8H24J-4-2

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella populi strain 8H24J-4-2 scaffold_14, whole genome

Gene Summary

Adenine Count

532309 bp

Thymine Count

531264 bp

Guanine Count

1176481 bp

Cytosine Count

1177835 bp

Genome Length

3418961 bp

Protein-coding Genes

3116 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseELQ92_05635Not AvailablePositive1188415 - 118958740215.7
response regulator transcription factorELQ92_05640Not AvailablePositive1189584 - 119024923984.1
shoct domain-containing proteinELQ92_05645Not AvailablePositive1190484 - 11907088148.98
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseELQ92_05650Not AvailablePositive1190802 - 119194139888.9
moxr family atpaseELQ92_05655Not AvailablePositive1192111 - 119311536593.9
duf58 domain-containing proteinELQ92_05660Not AvailablePositive1193123 - 119401032965.8
vwa domain-containing proteinELQ92_05665Not AvailablePositive1194337 - 119547641410.3
vwa domain-containing proteinELQ92_05670Not AvailablePositive1195458 - 119649836313.1
hypothetical proteinELQ92_05675Not AvailablePositive1196491 - 119733330255.4
proline--trna ligaseELQ92_05680Not AvailablePositive1197410 - 119918864663.5

Displaying genes 1101 – 1110 of 3167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.