Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum borinquense |
| Strain | strain N11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 40 |
| Temperature range | Mesophilic |
| Habitat | Marakkanam solar salterns; solar salterns of Cabo Rojo, Puerto Rico |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
802578 bp
Thymine Count
802896 bp
Guanine Count
1195948 bp
Cytosine Count
1192507 bp
Genome Length
4002736 bp
Protein-coding Genes
3790 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | ELS19_01700 | Not Available | Negative | 323396 - 323998 | 21371.9 |
| preprotein translocase subunit sec61beta | ELS19_01705 | Not Available | Negative | 324103 - 324267 | 5660.9 |
| thioredoxin | ELS19_01710 | Not Available | Positive | 324454 - 324720 | 10099.6 |
| 50s ribosomal protein l40e | ELS19_01715 | Not Available | Positive | 324826 - 324975 | 5596.85 |
| mbl fold metallo-hydrolase | ELS19_01720 | Not Available | Negative | 325052 - 325678 | 23048.4 |
| death domain-associated protein | ELS19_01725 | Not Available | Positive | 325844 - 326020 | 6558.89 |
| duf99 family protein | ELS19_01730 | Not Available | Positive | 326030 - 326617 | 20883.7 |
| uracil-dna glycosylase | ELS19_01735 | Not Available | Positive | 326697 - 327299 | 21691.3 |
| phosphonate abc transporter, permease protein phne | ELS19_01740 | Not Available | Negative | 327360 - 328325 | 35337.6 |
| phosphonate abc transporter atp-binding protein | ELS19_01745 | Not Available | Negative | 328322 - 329077 | 27402.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
