Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum borinquense |
| Strain | strain N11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 40 |
| Temperature range | Mesophilic |
| Habitat | Marakkanam solar salterns; solar salterns of Cabo Rojo, Puerto Rico |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
802578 bp
Thymine Count
802896 bp
Guanine Count
1195948 bp
Cytosine Count
1192507 bp
Genome Length
4002736 bp
Protein-coding Genes
3790 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit alpha | ELS19_16535 | Not Available | Negative | 3173434 - 3175971 | 95366.8 |
| transcriptional repressor nrdr | ELS19_16540 | Not Available | Negative | 3175964 - 3176473 | 19396.3 |
| sodium:calcium antiporter | ELS19_16545 | Not Available | Positive | 3176667 - 3177680 | 35389.5 |
| hypothetical protein | ELS19_16550 | Not Available | Negative | 3177775 - 3178140 | 14222.6 |
| serine protease | ELS19_16560 | Not Available | Negative | 3179278 - 3180306 | 37230.9 |
| rhomboid family intramembrane serine protease | ELS19_16565 | Not Available | Positive | 3180402 - 3181001 | 20397.5 |
| winged helix-turn-helix domain-containing protein | ELS19_16570 | Not Available | Negative | 3181087 - 3181329 | 9069.75 |
| fad-binding protein | ELS19_16575 | Not Available | Negative | 3181503 - 3182081 | 19999.8 |
| upf0104 family protein | ELS19_16580 | Not Available | Negative | 3182185 - 3183186 | 34105.2 |
| pas domain s-box protein | ELS19_16585 | Not Available | Positive | 3183376 - 3185892 | 93053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
