Labedella endophytica strain EGI 6500705

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Labedella

Description

Labedella endophytica strain EGI 6500705 is a Gram-positive, rod-shaped bacterium characterized by its single replicon. This strain is cataloged under the accession number RZGZ00000000.1, which provides a reference for its genomic data. The Gram-positive nature of L. endophytica indicates the presence of a thick peptidoglycan layer in its cell wall, a feature that is commonly associated with certain physiological traits, including susceptibility to specific antibiotics and a distinctive response in staining procedures. The rod shape is a common morphological characteristic among many bacterial species, and it may influence the bacterium's motility and colonization abilities. The presence of a single replicon suggests a streamlined genomic architecture, which can be advantageous for efficient replication and stability of the genetic material. This trait may also reflect adaptations to its ecological niche, potentially allowing L. endophytica to thrive in specific environments. In a broader biological or ecological context, the classification of L. endophytica as an endophyte implies that it may reside within plant tissues without causing harm to the host. Endophytes often play significant roles in their ecosystems, including enhancing plant growth, promoting stress resistance, and contributing to nutrient cycling. Understanding the characteristics of L. endophytica strain EGI 6500705 may thus provide insights into its interactions within plant systems and its potential applications in agriculture or biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLabedella
SpeciesLabedella endophytica
Strainstrain EGI 6500705

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labedella endophytica strain EGI 6500705 scaffold_13, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidophosphoribosyltransferaseELQ94_08375Not AvailableNegative1802438 - 180389553429.9
phosphoribosylformylglycinamidine cyclo-ligaseELQ94_08380Not AvailableNegative1804019 - 180512537160.9
hypothetical proteinELQ94_08385Not AvailableNegative1805122 - 180555915082.0
hypothetical proteinELQ94_08390Not AvailableNegative1805657 - 180603112982.4
phosphoribosylamine--glycine ligaseELQ94_08395Not AvailablePositive1806051 - 180734044224.1
duf3131 domain-containing proteinELQ94_08400Not AvailableNegative1807389 - 180923964125.3
duf3131 domain-containing proteinELQ94_08405Not AvailableNegative1809374 - 181102959092.8
pkd domain-containing proteinELQ94_08410Not AvailableNegative1811284 - 1814790120673.0
phosphoribosylaminoimidazolesuccinocarboxamide synthaseELQ94_08415Not AvailablePositive1814893 - 181582533667.5
hypothetical proteinELQ94_08420Not AvailableNegative1815856 - 181665927159.1

Displaying genes 1661 – 1670 of 3386 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.