Dyella dinghuensis strain DHOA06

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella dinghuensis strain DHOA06 is a Gram-negative, rod-shaped bacterium distinguished by its single replicon. This strain has been characterized with the accession number RYZR00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Dyella dinghuensis possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group of bacteria. This structural characteristic often contributes to the organism's resistance to certain antibiotics and influences its interaction with the environment. The rod shape of Dyella dinghuensis suggests that it may possess specific adaptations for motility and nutrient acquisition, which can be crucial for its survival in various ecological niches. The presence of a single replicon may also indicate a streamlined genomic organization, potentially allowing for efficient regulation of cellular processes and responses to environmental changes. From a biological and ecological perspective, the traits of Dyella dinghuensis strain DHOA06 may suggest its role in nutrient cycling and interactions within its habitat. Its Gram-negative nature and rod shape could facilitate its involvement in various biogeochemical processes. Understanding the characteristics of this strain can provide insights into its ecological functions and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella dinghuensis
Strainstrain DHOA06

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella dinghuensis strain DHOA06 scaffold15, whole genome shotgun

Gene Summary

Adenine Count

863609 bp

Thymine Count

862508 bp

Guanine Count

1243679 bp

Cytosine Count

1249048 bp

Genome Length

4219944 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome o ubiquinol oxidase subunit iEKH79_02490Not AvailablePositive550347 - 55235974812.8
cytochrome o ubiquinol oxidase subunit iiiEKH79_02495Not AvailablePositive552363 - 55298022614.7
cytochrome o ubiquinol oxidase subunit ivEKH79_02500Not AvailablePositive552980 - 55335713275.7
ctp synthaseEKH79_02505Not AvailablePositive553556 - 55522961664.0
3-deoxy-8-phosphooctulonate synthaseEKH79_02510Not AvailablePositive555226 - 55605929892.1
phosphopyruvate hydrataseEKH79_02515Not AvailablePositive556123 - 55742145925.7
cell division protein ftsbEKH79_02520Not AvailablePositive557703 - 55803211630.0
trna pseudouridine(13) synthase trudEKH79_02525Not AvailablePositive558103 - 55912837791.7
smr domain proteinEKH79_02530Not AvailableNegative559132 - 55967719830.0
5'/3'-nucleotidase sureEKH79_02535Not AvailablePositive559845 - 56063628182.5

Displaying genes 501 – 510 of 3728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.