Dyella dinghuensis strain DHOA06

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella dinghuensis strain DHOA06 is a Gram-negative, rod-shaped bacterium distinguished by its single replicon. This strain has been characterized with the accession number RYZR00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Dyella dinghuensis possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group of bacteria. This structural characteristic often contributes to the organism's resistance to certain antibiotics and influences its interaction with the environment. The rod shape of Dyella dinghuensis suggests that it may possess specific adaptations for motility and nutrient acquisition, which can be crucial for its survival in various ecological niches. The presence of a single replicon may also indicate a streamlined genomic organization, potentially allowing for efficient regulation of cellular processes and responses to environmental changes. From a biological and ecological perspective, the traits of Dyella dinghuensis strain DHOA06 may suggest its role in nutrient cycling and interactions within its habitat. Its Gram-negative nature and rod shape could facilitate its involvement in various biogeochemical processes. Understanding the characteristics of this strain can provide insights into its ecological functions and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella dinghuensis
Strainstrain DHOA06

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella dinghuensis strain DHOA06 scaffold15, whole genome shotgun

Gene Summary

Adenine Count

863609 bp

Thymine Count

862508 bp

Guanine Count

1243679 bp

Cytosine Count

1249048 bp

Genome Length

4219944 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bamdEKH79_14730Not AvailableNegative3275042 - 327590232822.1
23s rrna pseudouridine(1911/1915/1917) synthase rludEKH79_14735Not AvailablePositive3276263 - 327723735443.9
peptidoglycan editing factor pgefEKH79_14740Not AvailablePositive3277269 - 327801826950.8
atp-dependent chaperone clpbEKH79_14745Not AvailablePositive3278149 - 328073195938.5
phospholipase c, phosphocholine-specificEKH79_14750Not AvailableNegative3280923 - 328301374479.2
tonb-dependent receptorEKH79_14755Not AvailableNegative3283261 - 328573888849.8
cob(i)yrinic acid a,c-diamide adenosyltransferaseEKH79_14760Not AvailablePositive3286380 - 328698222026.4
cobyrinate a,c-diamide synthaseEKH79_14765Not AvailablePositive3287006 - 328827445778.9
cobalamin biosynthesis proteinEKH79_14770Not AvailablePositive3288271 - 328919132987.1
threonine-phosphate decarboxylaseEKH79_14775Not AvailablePositive3289184 - 329016736384.4

Displaying genes 2931 – 2940 of 3728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.