Dyella dinghuensis strain DHOA06

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella dinghuensis strain DHOA06 is a Gram-negative, rod-shaped bacterium distinguished by its single replicon. This strain has been characterized with the accession number RYZR00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Dyella dinghuensis possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group of bacteria. This structural characteristic often contributes to the organism's resistance to certain antibiotics and influences its interaction with the environment. The rod shape of Dyella dinghuensis suggests that it may possess specific adaptations for motility and nutrient acquisition, which can be crucial for its survival in various ecological niches. The presence of a single replicon may also indicate a streamlined genomic organization, potentially allowing for efficient regulation of cellular processes and responses to environmental changes. From a biological and ecological perspective, the traits of Dyella dinghuensis strain DHOA06 may suggest its role in nutrient cycling and interactions within its habitat. Its Gram-negative nature and rod shape could facilitate its involvement in various biogeochemical processes. Understanding the characteristics of this strain can provide insights into its ecological functions and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella dinghuensis
Strainstrain DHOA06

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella dinghuensis strain DHOA06 scaffold15, whole genome shotgun

Gene Summary

Adenine Count

863609 bp

Thymine Count

862508 bp

Guanine Count

1243679 bp

Cytosine Count

1249048 bp

Genome Length

4219944 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin acylase family proteinEKH79_07050Not AvailablePositive1563195 - 156560387902.9
succinyl-diaminopimelate desuccinylaseEKH79_07055Not AvailableNegative1565617 - 156676841036.9
spx/mgsr family rna polymerase-binding regulatory proteinEKH79_07060Not AvailableNegative1566774 - 156713313448.2
alkaline phytoceramidaseEKH79_07065Not AvailableNegative1567138 - 156790228333.4
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseEKH79_07070Not AvailableNegative1567913 - 156874029089.8
pepsy domain-containing proteinEKH79_07075Not AvailableNegative1568825 - 156932817965.3
[protein-pii] uridylyltransferaseEKH79_07080Not AvailableNegative1569418 - 157206098540.5
type i methionyl aminopeptidaseEKH79_07085Not AvailableNegative1572129 - 157289327438.1
30s ribosomal protein s2EKH79_07090Not AvailablePositive1573202 - 157409532297.6
elongation factor tsEKH79_07095Not AvailablePositive1574162 - 157504330725.9

Displaying genes 1411 – 1420 of 3728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.