Dyella dinghuensis strain DHOA06

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella dinghuensis strain DHOA06 is a Gram-negative, rod-shaped bacterium distinguished by its single replicon. This strain has been characterized with the accession number RYZR00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Dyella dinghuensis possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group of bacteria. This structural characteristic often contributes to the organism's resistance to certain antibiotics and influences its interaction with the environment. The rod shape of Dyella dinghuensis suggests that it may possess specific adaptations for motility and nutrient acquisition, which can be crucial for its survival in various ecological niches. The presence of a single replicon may also indicate a streamlined genomic organization, potentially allowing for efficient regulation of cellular processes and responses to environmental changes. From a biological and ecological perspective, the traits of Dyella dinghuensis strain DHOA06 may suggest its role in nutrient cycling and interactions within its habitat. Its Gram-negative nature and rod shape could facilitate its involvement in various biogeochemical processes. Understanding the characteristics of this strain can provide insights into its ecological functions and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella dinghuensis
Strainstrain DHOA06

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella dinghuensis strain DHOA06 scaffold15, whole genome shotgun

Gene Summary

Adenine Count

863609 bp

Thymine Count

862508 bp

Guanine Count

1243679 bp

Cytosine Count

1249048 bp

Genome Length

4219944 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent monooxygenaseEKH79_06050Not AvailablePositive1354288 - 135565849595.4
duf3293 domain-containing proteinEKH79_06055Not AvailablePositive1355651 - 135608516218.2
cytochrome c biogenesis heme-transporting atpase ccmaEKH79_06060Not AvailablePositive1356107 - 135674223147.8
heme exporter protein ccmbEKH79_06065Not AvailablePositive1356735 - 135743024139.2
heme abc transporter permeaseEKH79_06070Not AvailablePositive1357433 - 135819128258.0
heme exporter protein ccmdEKH79_06075Not AvailablePositive1358188 - 13583978060.75
cytochrome c biogenesis protein ccmeEKH79_06080Not AvailablePositive1358424 - 135889417101.6
heme lyase ccmf/nrfe family subunitEKH79_06085Not AvailablePositive1358891 - 136086471536.4
dsbe family thiol:disulfide interchange proteinEKH79_06090Not AvailablePositive1360861 - 136140019554.8
cytochrome c-type biogenesis protein ccmhEKH79_06095Not AvailablePositive1361586 - 136201716153.4

Displaying genes 1211 – 1220 of 3728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.