Dyella dinghuensis strain DHOA06

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella dinghuensis strain DHOA06 is a Gram-negative, rod-shaped bacterium distinguished by its single replicon. This strain has been characterized with the accession number RYZR00000000.1, which provides a reference for its genomic data. The Gram-negative classification indicates that Dyella dinghuensis possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a defining feature of this group of bacteria. This structural characteristic often contributes to the organism's resistance to certain antibiotics and influences its interaction with the environment. The rod shape of Dyella dinghuensis suggests that it may possess specific adaptations for motility and nutrient acquisition, which can be crucial for its survival in various ecological niches. The presence of a single replicon may also indicate a streamlined genomic organization, potentially allowing for efficient regulation of cellular processes and responses to environmental changes. From a biological and ecological perspective, the traits of Dyella dinghuensis strain DHOA06 may suggest its role in nutrient cycling and interactions within its habitat. Its Gram-negative nature and rod shape could facilitate its involvement in various biogeochemical processes. Understanding the characteristics of this strain can provide insights into its ecological functions and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella dinghuensis
Strainstrain DHOA06

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella dinghuensis strain DHOA06 scaffold15, whole genome shotgun

Gene Summary

Adenine Count

863609 bp

Thymine Count

862508 bp

Guanine Count

1243679 bp

Cytosine Count

1249048 bp

Genome Length

4219944 bp

Protein-coding Genes

3670 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell wall hydrolaseEKH79_06000Not AvailablePositive1345263 - 134568515731.8
glycine zipper 2tm domain-containing proteinEKH79_06005Not AvailableNegative1345763 - 134624216177.4
glycine zipper 2tm domain-containing proteinEKH79_06010Not AvailableNegative1346264 - 134689620711.4
tatd family deoxyribonucleaseEKH79_06015Not AvailablePositive1347064 - 134783128419.9
marr family transcriptional regulatorEKH79_06020Not AvailablePositive1347921 - 134844519870.6
efflux transporter outer membrane subunitEKH79_06025Not AvailablePositive1348442 - 135001956596.0
hlyd family efflux transporter periplasmic adaptor subunitEKH79_06030Not AvailablePositive1350006 - 135121142781.6
dha2 family efflux mfs transporter permease subunitEKH79_06035Not AvailablePositive1351236 - 135278956121.8
polyhydroxyalkanoate synthesis repressor pharEKH79_06040Not AvailablePositive1352877 - 135338019125.8
acetoacetyl-coa reductaseEKH79_06045Not AvailablePositive1353451 - 135421226999.3

Displaying genes 1201 – 1210 of 3728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.