Dyella choica strain 4 M-K27

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella choica strain 4 M-K27 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for Dyella choica strain 4 M-K27 is RYYV00000000.1, which serves as a unique identifier for its genomic data. The classification of Dyella choica within the broader context of microbiology suggests its potential ecological roles, particularly in relation to its environments. Gram-negative bacteria, including Dyella choica, are often involved in nutrient cycling and can contribute to the decomposition of organic materials. This trait is essential for maintaining ecosystem health and sustainability. Furthermore, the presence of a single replicon may imply specific evolutionary advantages, such as reduced metabolic burden and efficient replication under certain conditions. Understanding the genetic and phenotypic characteristics of Dyella choica strain 4 M-K27 can provide insights into its ecological functions and interactions within microbial communities. This information can be pivotal for future studies focusing on microbial diversity and the roles of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella choica
Strainstrain 4 M-K27

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella choica strain 4 M-K27 scaffold68, whole genome shotgun

Gene Summary

Adenine Count

1050159 bp

Thymine Count

1052549 bp

Guanine Count

1690814 bp

Cytosine Count

1695778 bp

Genome Length

5494293 bp

Protein-coding Genes

4607 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hishEKH80_17995Not AvailablePositive4151704 - 415229421149.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseEKH80_18000Not AvailablePositive4152488 - 415321626352.2
imidazole glycerol phosphate synthase subunit hisfEKH80_18005Not AvailablePositive4153210 - 415400128768.5
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieEKH80_18010Not AvailablePositive4153994 - 415462622975.4
peptidase c13EKH80_18015Not AvailableNegative4154875 - 415587635959.0
acireductone synthaseEKH80_18020Not AvailableNegative4155887 - 415657325807.6
cupin domain-containing proteinEKH80_18025Not AvailableNegative4156665 - 415722220818.4
methylthioribulose 1-phosphate dehydrataseEKH80_18030Not AvailableNegative4157219 - 415786623992.4
twin-arginine translocation signal domain-containing proteinEKH80_18035Not AvailablePositive4158024 - 415835611491.5
amino acid permeaseEKH80_18040Not AvailableNegative4158757 - 416022652486.9

Displaying genes 3551 – 3560 of 4662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.