Dyella choica strain 4 M-K27

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella choica strain 4 M-K27 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for Dyella choica strain 4 M-K27 is RYYV00000000.1, which serves as a unique identifier for its genomic data. The classification of Dyella choica within the broader context of microbiology suggests its potential ecological roles, particularly in relation to its environments. Gram-negative bacteria, including Dyella choica, are often involved in nutrient cycling and can contribute to the decomposition of organic materials. This trait is essential for maintaining ecosystem health and sustainability. Furthermore, the presence of a single replicon may imply specific evolutionary advantages, such as reduced metabolic burden and efficient replication under certain conditions. Understanding the genetic and phenotypic characteristics of Dyella choica strain 4 M-K27 can provide insights into its ecological functions and interactions within microbial communities. This information can be pivotal for future studies focusing on microbial diversity and the roles of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella choica
Strainstrain 4 M-K27

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella choica strain 4 M-K27 scaffold68, whole genome shotgun

Gene Summary

Adenine Count

1050159 bp

Thymine Count

1052549 bp

Guanine Count

1690814 bp

Cytosine Count

1695778 bp

Genome Length

5494293 bp

Protein-coding Genes

4607 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2442 domain-containing proteinEKH80_17945Not AvailablePositive4141973 - 414242815789.1
Trna-proNot AvailableNot AvailablePositive4142614 - 4142690Not Available
histidine--trna ligaseEKH80_17955Not AvailablePositive4142853 - 414422651202.4
aromatic amino acid lyaseEKH80_17960Not AvailablePositive4144327 - 414621968798.1
duf998 domain-containing proteinEKH80_17965Not AvailableNegative4146216 - 414685123009.2
dna-binding transcriptional regulatorEKH80_17970Not AvailablePositive4147052 - 414738712420.0
atp phosphoribosyltransferaseEKH80_17975Not AvailablePositive4147384 - 414827732160.4
histidinol dehydrogenaseEKH80_17980Not AvailablePositive4148290 - 414959745521.3
histidinol-phosphate transaminaseEKH80_17985Not AvailablePositive4149594 - 415064337541.7
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbEKH80_17990Not AvailablePositive4150640 - 415170439320.1

Displaying genes 3541 – 3550 of 4662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.