Dyella choica strain 4 M-K27

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella choica strain 4 M-K27 is a Gram-negative bacterium characterized by its rod shape. This strain is notable for possessing a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The accession number for Dyella choica strain 4 M-K27 is RYYV00000000.1, which serves as a unique identifier for its genomic data. The classification of Dyella choica within the broader context of microbiology suggests its potential ecological roles, particularly in relation to its environments. Gram-negative bacteria, including Dyella choica, are often involved in nutrient cycling and can contribute to the decomposition of organic materials. This trait is essential for maintaining ecosystem health and sustainability. Furthermore, the presence of a single replicon may imply specific evolutionary advantages, such as reduced metabolic burden and efficient replication under certain conditions. Understanding the genetic and phenotypic characteristics of Dyella choica strain 4 M-K27 can provide insights into its ecological functions and interactions within microbial communities. This information can be pivotal for future studies focusing on microbial diversity and the roles of bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella choica
Strainstrain 4 M-K27

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella choica strain 4 M-K27


Gene Summary

Adenine Count

1050159 bp

Thymine Count

1052549 bp

Guanine Count

1690814 bp

Cytosine Count

1695778 bp

Genome Length

5494293 bp

Protein-coding Genes

4607 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterEKH80_09145Not AvailablePositive2151697 - 215313050497.5
x-pro dipeptidyl-peptidaseEKH80_09150Not AvailablePositive2153379 - 215498655533.4
uroporphyrinogen decarboxylaseEKH80_09155Not AvailableNegative2155074 - 215613838631.7
hypothetical proteinEKH80_09160Not AvailableNegative2156146 - 21564099978.94
3-dehydroquinate synthaseEKH80_09165Not AvailableNegative2156625 - 215772538882.0
shikimate kinaseEKH80_09170Not AvailableNegative2157725 - 215826719614.6
nad-dependent epimerase/dehydratase family proteinEKH80_09175Not AvailablePositive2158312 - 215915730259.2
response regulator transcription factorEKH80_09180Not AvailableNegative2159164 - 215990426964.9
kinaseEKH80_09185Not AvailableNegative2160164 - 216099431506.9
pyridoxamine 5'-phosphate oxidaseEKH80_09190Not AvailablePositive2161034 - 216162122393.4

Displaying genes 1801 – 1810 of 4662 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.