Candidimonas sp. SYP-B2681

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Candidimonas

Description

Candidimonas sp. SYP-B2681 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait may suggest a specific adaptation to its ecological niche, allowing for efficient replication and expression of essential genes. The organism is cataloged under the accession number RYDV00000000.1, which provides a unique identifier for its genomic data in biological databases. The presence of only one replicon might also imply a reduced complexity in its genetic regulation compared to organisms with multiple replicons. Such simplicity can be advantageous in certain environments where rapid growth and adaptation are necessary. The ecological implications of Candidimonas sp. SYP-B2681 could be significant, although specific details about its habitat or interactions with other organisms are not provided. However, the streamlined genomic configuration may enable Candidimonas sp. to thrive in niche environments, potentially contributing to the microbial diversity and functioning of those ecosystems. Further research could clarify its role within its habitat, potentially highlighting its significance in nutrient cycling or interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusCandidimonas
SpeciesCandidimonas sp. SYP-B2681
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidimonas sp. SYP-B2681 scaffold31, whole genome shotgun

Gene Summary

Adenine Count

884718 bp

Thymine Count

895548 bp

Guanine Count

1115805 bp

Cytosine Count

1098117 bp

Genome Length

3996334 bp

Protein-coding Genes

3634 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ornithine cyclodeaminase family proteinEKL30_05190Not AvailablePositive1081720 - 108265232547.2
abc transporter substrate-binding proteinEKL30_05195Not AvailableNegative1082717 - 108386540206.8
rna polymerase sigma factor rpohEKL30_05200Not AvailablePositive1084136 - 108501732884.3
cyclic nucleotide-binding domain-containing proteinEKL30_05205Not AvailablePositive1085382 - 108792293276.6
sco family proteinEKL30_05210Not AvailableNegative1087950 - 108855221174.4
protoheme ix farnesyltransferaseEKL30_05215Not AvailableNegative1088573 - 108946332619.0
heme a synthaseEKL30_05220Not AvailableNegative1089460 - 109047037247.6
hypothetical proteinEKL30_05225Not AvailableNegative1090480 - 109112423316.4
surf1 family proteinEKL30_05230Not AvailableNegative1091134 - 109194329537.7
twin transmembrane helix small proteinEKL30_05235Not AvailablePositive1091978 - 10921847432.4

Displaying genes 1011 – 1020 of 3681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.