Pseudomonas sp. C 49-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. C 49-2 is characterized by having a single replicon, which indicates a streamlined genomic organization. The strain is cataloged under the accession number RXYG00000000.1, providing a reference for researchers interested in its genetic composition and potential applications. As a member of the Pseudomonas genus, this strain may exhibit traits typically associated with Pseudomonas species, such as metabolic versatility, which allows it to thrive in diverse environments and utilize a wide range of substrates. Pseudomonas species are often noted for their roles in bioremediation, suggesting that Pseudomonas sp. C 49-2 could potentially be involved in the degradation of environmental pollutants. Moreover, the presence of a single replicon may contribute to efficient regulatory mechanisms within the organism, potentially enhancing its adaptability to varying ecological niches. This trait can be particularly advantageous in dynamic environments where rapid responses to changing conditions are necessary. In summary, Pseudomonas sp. C 49-2, with its single replicon and established genomic reference, may possess traits that contribute to its ecological versatility and potential utility in bioremediation efforts. Understanding the specific capabilities and functions of this strain could provide valuable insights into its role within microbial communities and its applications in environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. C 49-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. C 49-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. C 49-2 NODE_43_length_589_cov_95.6562, whole

Gene Summary

Adenine Count

1271440 bp

Thymine Count

1266749 bp

Guanine Count

1914536 bp

Cytosine Count

1913257 bp

Genome Length

6369470 bp

Protein-coding Genes

5673 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catechol 1,2-dioxygenaseEJ576_25470Not AvailableNegative5426663 - 542759234482.3
muconolactone delta-isomeraseEJ576_25475Not AvailableNegative5427634 - 542792411182.5
muconate cycloisomeraseEJ576_25480Not AvailableNegative5427937 - 542906440296.8
lysr family transcriptional regulatorEJ576_25485Not AvailablePositive5429179 - 543005432179.2
helix-turn-helix domain-containing proteinEJ576_25490Not AvailableNegative5430188 - 543116836854.9
anthranilate 1,2-dioxygenase large subunitEJ576_25495Not AvailablePositive5431479 - 543287052496.7
anthranilate 1,2-dioxygenase small subunitEJ576_25500Not AvailablePositive5432870 - 543336119364.8
anthranilate 1,2-dioxygenase electron transfer component antcEJ576_25505Not AvailablePositive5433499 - 543450636791.6
amino acid permeaseEJ576_25510Not AvailablePositive5434579 - 543598250688.1
tryptophan 2,3-dioxygenaseEJ576_25515Not AvailableNegative5436124 - 543698132920.4

Displaying genes 5001 – 5010 of 5807 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.