Croceicoccus ponticola strain GM-16 17

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus ponticola strain GM-16 17 is characterized by having a single replicon, which is indicative of its genomic architecture. The strain is cataloged under the accession number RXOL00000000.1, providing a reference point for further studies and data analysis. As a member of the Croceicoccus genus, this strain may contribute to our understanding of microbial diversity and ecological roles in its native environment. While specific ecological interactions or metabolic capabilities are not detailed in the provided information, the presence of a single replicon can suggest a streamlined genomic organization, which is often associated with specialized adaptations to particular ecological niches. Further exploration of Croceicoccus ponticola strain GM-16 17 could reveal insights into its potential applications in biotechnology or its role in biogeochemical cycles. Understanding its genetic makeup could aid in elucidating its functions within microbial communities, thus highlighting the importance of such strains in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus ponticola
Strainstrain GM-16 17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus ponticola strain GM-16 17, whole genome shotgun

Gene Summary

Adenine Count

614807 bp

Thymine Count

613854 bp

Guanine Count

1002124 bp

Cytosine Count

1013925 bp

Genome Length

3245790 bp

Protein-coding Genes

2987 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lpxtg cell wall anchor domain-containing proteinEKN06_14810Not AvailableNegative3101418 - 31015795456.4
dna-deoxyinosine glycosylaseEKN06_14815Not AvailableNegative3101683 - 310218918419.2
gfa family proteinEKN06_14820Not AvailableNegative3102186 - 310259014426.1
3-isopropylmalate dehydratase large subunitEKN06_14825Not AvailableNegative3102592 - 310401950531.0
beta-carotene hydroxylaseEKN06_14830Not AvailablePositive3104088 - 310461519859.5
hypothetical proteinEKN06_14835Not AvailableNegative3104653 - 31048748556.97
l,d-transpeptidaseEKN06_14840Not AvailableNegative3105071 - 310639949463.7
hypothetical proteinEKN06_14845Not AvailableNegative3106418 - 31066698293.82
sufe family proteinEKN06_14850Not AvailableNegative3106853 - 310726315022.9
hypothetical proteinEKN06_14855Not AvailableNegative3107300 - 31075579404.39

Displaying genes 2901 – 2910 of 3039 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.