Croceicoccus ponticola strain GM-16 17

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus ponticola strain GM-16 17 is characterized by having a single replicon, which is indicative of its genomic architecture. The strain is cataloged under the accession number RXOL00000000.1, providing a reference point for further studies and data analysis. As a member of the Croceicoccus genus, this strain may contribute to our understanding of microbial diversity and ecological roles in its native environment. While specific ecological interactions or metabolic capabilities are not detailed in the provided information, the presence of a single replicon can suggest a streamlined genomic organization, which is often associated with specialized adaptations to particular ecological niches. Further exploration of Croceicoccus ponticola strain GM-16 17 could reveal insights into its potential applications in biotechnology or its role in biogeochemical cycles. Understanding its genetic makeup could aid in elucidating its functions within microbial communities, thus highlighting the importance of such strains in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus ponticola
Strainstrain GM-16 17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus ponticola strain GM-16 17, whole genome shotgun

Gene Summary

Adenine Count

614807 bp

Thymine Count

613854 bp

Guanine Count

1002124 bp

Cytosine Count

1013925 bp

Genome Length

3245790 bp

Protein-coding Genes

2987 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron abc transporter substrate-binding proteinEKN06_01290Not AvailablePositive258816 - 25962527951.8
iron abc transporter permeaseEKN06_01295Not AvailablePositive259622 - 26058132627.3
abc transporter atp-binding proteinEKN06_01300Not AvailablePositive260581 - 26134526713.3
rna 2',3'-cyclic phosphodiesteraseEKN06_01305Not AvailableNegative261392 - 26194020341.3
excinuclease abc subunit uvraEKN06_01310Not AvailablePositive262209 - 265157107316.0
hypothetical proteinEKN06_01315Not AvailablePositive265261 - 26566814401.2
septal ring lytic transglycosylase rlpa family proteinEKN06_01320Not AvailableNegative265678 - 26621418825.3
argininosuccinate synthaseEKN06_01325Not AvailableNegative267048 - 26826545198.7
mate family efflux transporterEKN06_01330Not AvailableNegative268275 - 26957944740.7
class i sam-dependent methyltransferaseEKN06_01335Not AvailableNegative269688 - 27094146711.1

Displaying genes 261 – 270 of 3039 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.