Croceicoccus ponticola strain GM-16 17

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Erythrobacteraceae

Genus

Croceicoccus

Description

Croceicoccus ponticola strain GM-16 17 is characterized by having a single replicon, which is indicative of its genomic architecture. The strain is cataloged under the accession number RXOL00000000.1, providing a reference point for further studies and data analysis. As a member of the Croceicoccus genus, this strain may contribute to our understanding of microbial diversity and ecological roles in its native environment. While specific ecological interactions or metabolic capabilities are not detailed in the provided information, the presence of a single replicon can suggest a streamlined genomic organization, which is often associated with specialized adaptations to particular ecological niches. Further exploration of Croceicoccus ponticola strain GM-16 17 could reveal insights into its potential applications in biotechnology or its role in biogeochemical cycles. Understanding its genetic makeup could aid in elucidating its functions within microbial communities, thus highlighting the importance of such strains in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyErythrobacteraceae
GenusCroceicoccus
SpeciesCroceicoccus ponticola
Strainstrain GM-16 17

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Croceicoccus ponticola strain GM-16 17, whole genome shotgun

Gene Summary

Adenine Count

614807 bp

Thymine Count

613854 bp

Guanine Count

1002124 bp

Cytosine Count

1013925 bp

Genome Length

3245790 bp

Protein-coding Genes

2987 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine--trna ligaseEKN06_08880Not AvailableNegative1857588 - 185960075399.2
hypothetical proteinEKN06_08885Not AvailablePositive1859973 - 186058122201.4
transcriptional regulatorEKN06_08890Not AvailablePositive1860578 - 18607697271.81
duf898 domain-containing proteinEKN06_08895Not AvailablePositive1860852 - 186194941093.6
m48 family metallopeptidaseEKN06_08900Not AvailablePositive1861978 - 186304538514.6
alpha/beta hydrolaseEKN06_08905Not AvailablePositive1863068 - 186384427398.7
llm class flavin-dependent oxidoreductaseEKN06_08910Not AvailablePositive1863841 - 186482434489.6
nad(p)/fad-dependent oxidoreductaseEKN06_08915Not AvailablePositive1864933 - 186616543832.6
trna epoxyqueuosine(34) reductase quegEKN06_08920Not AvailableNegative1866155 - 186722538556.2
atp-binding cassette domain-containing proteinEKN06_08925Not AvailablePositive1867315 - 186832535672.9

Displaying genes 1761 – 1770 of 3039 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.