Hymenobacter gummosus strain KCTC 52166

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter gummosus strain KCTC 52166 is a Gram-negative, rod-shaped bacterium. This strain is notable for having a single replicon, which is indicative of its genomic organization. The complete genomic data for this strain is accessible under the accession number RXOF00000000.1. As a member of the Hymenobacter genus, H. gummosus is likely to exhibit characteristics typical of soil bacteria, such as the ability to degrade complex organic materials. The Gram-negative nature of this bacterium suggests it possesses an outer membrane that may contribute to its adaptability in various environments, including nutrient-poor habitats. The presence of a single replicon may provide insights into its evolutionary strategies and metabolic capabilities. This trait could indicate a streamlined genomic architecture, potentially allowing for efficient replication and maintenance of essential functions under specific ecological conditions. As such, Hymenobacter gummosus strain KCTC 52166 may play a role in soil health and nutrient cycling, reflecting its ecological significance in maintaining microbial diversity and contributing to the degradation of organic compounds in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter gummosus
Strainstrain KCTC 52166

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter gummosus strain KCTC 52166


Gene Summary

Adenine Count

1138878 bp

Thymine Count

1146899 bp

Guanine Count

2112804 bp

Cytosine Count

2122023 bp

Genome Length

6525284 bp

Protein-coding Genes

5415 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homogentisate 1,2-dioxygenaseEJV47_19885Not AvailableNegative4717775 - 471897745849.3
s41 family peptidaseEJV47_19890Not AvailableNegative4719102 - 472080862617.1
bacillithiol biosynthesis deacetylase bshb1EJV47_19895Not AvailableNegative4721226 - 472194527135.4
cysteine desulfuraseEJV47_19900Not AvailableNegative4721998 - 472318542994.9
ahpc/tsa family proteinEJV47_19905Not AvailableNegative4723419 - 472455841236.4
llm class flavin-dependent oxidoreductaseEJV47_19910Not AvailableNegative4724643 - 472566838388.4
hypothetical proteinEJV47_19915Not AvailableNegative4725718 - 472670435848.7
hypothetical proteinEJV47_19920Not AvailableNegative4727310 - 472762711958.6
hypothetical proteinEJV47_19925Not AvailablePositive4727742 - 472847326112.7
holliday junction resolvase ruvxEJV47_19930Not AvailablePositive4728630 - 472904915421.8

Displaying genes 3911 – 3920 of 5466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.