Hymenobacter gummosus strain KCTC 52166

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter gummosus strain KCTC 52166 is a Gram-negative, rod-shaped bacterium. This strain is notable for having a single replicon, which is indicative of its genomic organization. The complete genomic data for this strain is accessible under the accession number RXOF00000000.1. As a member of the Hymenobacter genus, H. gummosus is likely to exhibit characteristics typical of soil bacteria, such as the ability to degrade complex organic materials. The Gram-negative nature of this bacterium suggests it possesses an outer membrane that may contribute to its adaptability in various environments, including nutrient-poor habitats. The presence of a single replicon may provide insights into its evolutionary strategies and metabolic capabilities. This trait could indicate a streamlined genomic architecture, potentially allowing for efficient replication and maintenance of essential functions under specific ecological conditions. As such, Hymenobacter gummosus strain KCTC 52166 may play a role in soil health and nutrient cycling, reflecting its ecological significance in maintaining microbial diversity and contributing to the degradation of organic compounds in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter gummosus
Strainstrain KCTC 52166

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter gummosus strain KCTC 52166


Gene Summary

Adenine Count

1138878 bp

Thymine Count

1146899 bp

Guanine Count

2112804 bp

Cytosine Count

2122023 bp

Genome Length

6525284 bp

Protein-coding Genes

5415 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2911 domain-containing proteinEJV47_17455Not AvailablePositive4195348 - 419586918794.7
hypothetical proteinEJV47_17460Not AvailableNegative4195980 - 419692133964.1
hypothetical proteinEJV47_17465Not AvailableNegative4196985 - 419778829477.3
duf952 domain-containing proteinEJV47_17470Not AvailableNegative4197914 - 419826712961.5
hypothetical proteinEJV47_17475Not AvailableNegative4198425 - 419879914039.3
4-hydroxyphenylpyruvate dioxygenaseEJV47_17480Not AvailablePositive4198965 - 420009842324.9
hypothetical proteinEJV47_17485Not AvailableNegative4200439 - 420186652867.1
phospho-sugar mutaseEJV47_17490Not AvailablePositive4202354 - 420410564212.2
hypothetical proteinEJV47_17495Not AvailablePositive4204245 - 420473317569.8
hypothetical proteinEJV47_17500Not AvailableNegative4204920 - 420546820260.3

Displaying genes 3431 – 3440 of 5466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.