Hymenobacter gummosus strain KCTC 52166

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter gummosus strain KCTC 52166 is a Gram-negative, rod-shaped bacterium. This strain is notable for having a single replicon, which is indicative of its genomic organization. The complete genomic data for this strain is accessible under the accession number RXOF00000000.1. As a member of the Hymenobacter genus, H. gummosus is likely to exhibit characteristics typical of soil bacteria, such as the ability to degrade complex organic materials. The Gram-negative nature of this bacterium suggests it possesses an outer membrane that may contribute to its adaptability in various environments, including nutrient-poor habitats. The presence of a single replicon may provide insights into its evolutionary strategies and metabolic capabilities. This trait could indicate a streamlined genomic architecture, potentially allowing for efficient replication and maintenance of essential functions under specific ecological conditions. As such, Hymenobacter gummosus strain KCTC 52166 may play a role in soil health and nutrient cycling, reflecting its ecological significance in maintaining microbial diversity and contributing to the degradation of organic compounds in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter gummosus
Strainstrain KCTC 52166

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter gummosus strain KCTC 52166


Gene Summary

Adenine Count

1138878 bp

Thymine Count

1146899 bp

Guanine Count

2112804 bp

Cytosine Count

2122023 bp

Genome Length

6525284 bp

Protein-coding Genes

5415 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 2EJV47_10835Not AvailablePositive2540281 - 254135840642.9
susd/ragb family nutrient-binding outer membrane lipoproteinEJV47_10840Not AvailableNegative2541506 - 254309558672.8
susc/raga family tonb-linked outer membrane proteinEJV47_10845Not AvailableNegative2543109 - 2546303116278.0
tonb-dependent receptorEJV47_10850Not AvailablePositive2547268 - 2550477116507.0
ragb/susd family nutrient uptake outer membrane proteinEJV47_10855Not AvailablePositive2550497 - 255204156135.0
tonb-dependent receptorEJV47_10860Not AvailablePositive2552251 - 2555397113244.0
ragb/susd family nutrient uptake outer membrane proteinEJV47_10865Not AvailablePositive2555456 - 255707556423.6
sdr family nad(p)-dependent oxidoreductaseEJV47_10870Not AvailableNegative2557147 - 255787226266.4
atp-dependent protease atpase subunit hsluEJV47_10875Not AvailableNegative2557976 - 255939452148.8
type ix secretion system protein porqEJV47_10880Not AvailableNegative2559791 - 256085238141.8

Displaying genes 2131 – 2140 of 5466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.