Arcticibacter tournemirensis strain R1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Arcticibacter

Description

Arcticibacter tournemirensis strain R1 is a Gram-negative bacterium characterized by its rod shape. This strain contains a single replicon, which is an important feature for understanding its genetic organization and replication mechanisms. The strain is cataloged under the accession number RXOC00000000.1, providing a reference for genetic and genomic studies. The classification of Arcticibacter tournemirensis within the broader context of microbial ecology suggests its potential role in Arctic ecosystems, particularly in relation to nutrient cycling and interactions with other microbial populations. As a member of the Arcticibacter genus, this strain may possess adaptations that enable it to thrive in cold environments, although specific physiological traits and ecological functions remain unspecified in the provided data. The presence of unique microbial taxa such as Arcticibacter tournemirensis in Arctic regions underscores the significance of microbial diversity in extreme habitats. Such organisms can contribute to the resilience of ecosystems in the face of climate change, potentially influencing biogeochemical processes. Further research on Arcticibacter tournemirensis strain R1 may reveal more about its ecological roles and the adaptive strategies employed by microorganisms in polar environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusArcticibacter
SpeciesArcticibacter tournemirensis
Strainstrain R1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arcticibacter tournemirensis strain R1 R1_scaffold41, whole genome

Gene Summary

Adenine Count

1498040 bp

Thymine Count

1495248 bp

Guanine Count

1126779 bp

Cytosine Count

1157358 bp

Genome Length

5280343 bp

Protein-coding Genes

4172 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding protein 2EKH83_15680Not AvailableNegative3891347 - 389328172290.1
rod shape-determining protein mredEKH83_15685Not AvailableNegative3893282 - 389379719964.1
rod shape-determining protein mrecEKH83_15690Not AvailableNegative3893797 - 389463030789.1
rod shape-determining proteinEKH83_15695Not AvailableNegative3894721 - 389574336955.2
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseEKH83_15700Not AvailableNegative3895847 - 389737356021.3
rna polymerase sigma-70 factorEKH83_15705Not AvailablePositive3897773 - 389833021738.3
duf4974 domain-containing proteinEKH83_15710Not AvailablePositive3898443 - 389961243094.7
susc/raga family tonb-linked outer membrane proteinEKH83_15715Not AvailablePositive3899763 - 3903098124043.0
ragb/susd family nutrient uptake outer membrane proteinEKH83_15720Not AvailablePositive3903106 - 390455154360.5
hypothetical proteinEKH83_15725Not AvailablePositive3904562 - 390503517904.6

Displaying genes 3111 – 3120 of 4220 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.