Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | EKG39_03345 | Not Available | + | 776551 - 777243 | 24170.1 |
| cobalamin biosynthesis protein cbib | EKG39_03350 | Not Available | + | 777270 - 778253 | 36461.2 |
| duf2721 domain-containing protein | EKG39_03355 | Not Available | + | 778383 - 778760 | 14044.9 |
| trimeric intracellular cation channel family protein | EKG39_03360 | Not Available | + | 778757 - 779383 | 22168.1 |
| nuclear transport factor 2 family protein | EKG39_03365 | Not Available | + | 779380 - 779859 | 18420.2 |
| mfs transporter | EKG39_03370 | Not Available | + | 780042 - 781676 | 59120.6 |
| tyrosine--trna ligase | EKG39_03375 | Not Available | - | 781802 - 782998 | 43949.3 |
| peptidase m23 | EKG39_03380 | Not Available | + | 783139 - 784575 | 52922.5 |
| anhydro-n-acetylmuramic acid kinase | EKG39_03385 | Not Available | + | 784730 - 785839 | 39611.3 |
| transcriptional regulator | EKG39_03390 | Not Available | - | 785882 - 788017 | 80907.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
