Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | EKG39_03195 | Not Available | - | 739825 - 740445 | 22724.8 |
| rna polymerase sigma factor rpoe | EKG39_03200 | Not Available | - | 740473 - 741051 | 21903.1 |
| l-aspartate oxidase | EKG39_03205 | Not Available | + | 741252 - 742862 | 59742.8 |
| hypothetical protein | EKG39_03210 | Not Available | - | 742919 - 743341 | 16542.0 |
| succinate dehydrogenase assembly factor 2 family protein | EKG39_03215 | Not Available | - | 743322 - 743561 | 9284.18 |
| transcriptional activator nhar | EKG39_03220 | Not Available | - | 743638 - 744546 | 34272.6 |
| hypothetical protein | EKG39_03225 | Not Available | - | 744546 - 744929 | 14160.9 |
| na+/h+ antiporter nhaa | EKG39_03230 | Not Available | - | 744926 - 746125 | 41848.5 |
| thymidylate synthase | EKG39_03235 | Not Available | - | 746438 - 747289 | 32228.4 |
| sulfite exporter taue/safe family protein | EKG39_03240 | Not Available | - | 747488 - 748291 | 27855.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
