Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional riboflavin kinase/fad synthetase | EKG39_02945 | Not Available | - | 682835 - 683770 | 34517.0 |
| murein biosynthesis integral membrane protein murj | EKG39_02950 | Not Available | - | 683868 - 685427 | 56754.4 |
| 30s ribosomal protein s20 | EKG39_02955 | Not Available | + | 685674 - 685940 | 9731.91 |
| arsr family transcriptional regulator | EKG39_02960 | Not Available | - | 686083 - 686379 | 11341.0 |
| peptidase m28 family protein | EKG39_02965 | Not Available | + | 686515 - 687948 | 51472.7 |
| peroxide stress protein yaaa | EKG39_02970 | Not Available | - | 688086 - 688859 | 28893.6 |
| alanine:cation symporter family protein | EKG39_02975 | Not Available | - | 688994 - 690445 | 51203.3 |
| phosphoketolase family protein | EKG39_02980 | Not Available | + | 690873 - 693239 | 88823.7 |
| ompa family protein | EKG39_02985 | Not Available | + | 693494 - 694594 | 40368.7 |
| transaldolase | EKG39_02990 | Not Available | + | 694862 - 695818 | 35116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
