Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EKG39_02895 | Not Available | - | 671462 - 671764 | 11593.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EKG39_02900 | Not Available | - | 671761 - 672153 | 14023.8 |
| type iv pilin biogenesis protein | EKG39_02905 | Not Available | - | 672153 - 675728 | 127748.0 |
| pilus assembly protein pilx | EKG39_02910 | Not Available | - | 675733 - 676167 | 14847.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EKG39_02915 | Not Available | - | 676180 - 677169 | 36170.0 |
| type iv pilus modification protein pilv | EKG39_02920 | Not Available | - | 677170 - 677691 | 18591.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EKG39_02925 | Not Available | - | 677932 - 678879 | 34458.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EKG39_02930 | Not Available | - | 678883 - 679305 | 14729.3 |
| lipoprotein signal peptidase | EKG39_02935 | Not Available | - | 679311 - 679841 | 20232.2 |
| isoleucine--trna ligase | EKG39_02940 | Not Available | - | 679981 - 682803 | 105740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
