Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | EKG39_02590 | Not Available | + | 609699 - 610157 | 17705.4 |
| nyn domain-containing protein | EKG39_02595 | Not Available | + | 610327 - 610806 | 17901.3 |
| ybak/ebsc family protein | EKG39_02600 | Not Available | + | 610950 - 611429 | 17992.4 |
| porin | EKG39_02605 | Not Available | - | 611710 - 612891 | 44054.4 |
| l-threonine dehydrogenase | EKG39_02610 | Not Available | + | 613271 - 614419 | 39854.0 |
| cold-shock protein | EKG39_02615 | Not Available | - | 614938 - 615150 | 7556.76 |
| multidrug efflux rnd transporter permease subunit | EKG39_02620 | Not Available | - | 615503 - 618619 | 112245.0 |
| efflux rnd transporter periplasmic adaptor subunit | EKG39_02625 | Not Available | - | 618784 - 619959 | 42837.7 |
| cytoplasmic protein | EKG39_02630 | Not Available | + | 620578 - 620940 | 13712.1 |
| nad(p)/fad-dependent oxidoreductase | EKG39_02635 | Not Available | + | 621351 - 622652 | 47493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
