Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EKG39_02530 | Not Available | - | 594080 - 595183 | 40384.4 |
| riboflavin synthase | EKG39_02535 | Not Available | - | 595293 - 595955 | 23733.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EKG39_02540 | Not Available | - | 595960 - 597084 | 40341.9 |
| transcriptional regulator nrdr | EKG39_02545 | Not Available | - | 597149 - 597598 | 17027.6 |
| serine hydroxymethyltransferase | EKG39_02550 | Not Available | - | 597755 - 599011 | 45362.9 |
| energy-dependent translational throttle protein etta | EKG39_02555 | Not Available | + | 599511 - 601178 | 62349.0 |
| metallophosphoesterase | EKG39_02560 | Not Available | + | 601636 - 602730 | 41131.9 |
| mmcq/yjbr family dna-binding protein | EKG39_02575 | Not Available | - | 604526 - 604936 | 15303.6 |
| efflux rnd transporter permease subunit | EKG39_02580 | Not Available | - | 605175 - 608282 | 112736.0 |
| efflux rnd transporter periplasmic adaptor subunit | EKG39_02585 | Not Available | - | 608282 - 609394 | 39960.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
