Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | EKG39_22250 | Not Available | - | 5198758 - 5199060 | 11025.5 |
| abc transporter substrate-binding protein | EKG39_22255 | Not Available | - | 5199061 - 5199723 | 25379.5 |
| outer membrane lipid asymmetry maintenance protein mlad | EKG39_22260 | Not Available | - | 5199727 - 5200197 | 16843.4 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | EKG39_22265 | Not Available | - | 5200254 - 5201036 | 28094.3 |
| atp-binding cassette domain-containing protein | EKG39_22270 | Not Available | - | 5201100 - 5201915 | 29931.7 |
| calcium/sodium antiporter | EKG39_22275 | Not Available | + | 5202093 - 5203052 | 33728.2 |
| kpsf/gutq family sugar-phosphate isomerase | EKG39_22280 | Not Available | + | 5203092 - 5204069 | 34546.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | EKG39_22285 | Not Available | + | 5204157 - 5204708 | 20159.2 |
| lps export abc transporter periplasmic protein lptc | EKG39_22290 | Not Available | + | 5204705 - 5205262 | 20897.9 |
| lipopolysaccharide transport periplasmic protein lpta | EKG39_22295 | Not Available | + | 5205249 - 5205854 | 21971.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
