Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d family protein | EKG39_00060 | Not Available | + | 13630 - 15183 | 58509.7 |
| hd domain-containing protein | EKG39_00065 | Not Available | - | 15195 - 15317 | 4647.53 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | EKG39_00070 | Not Available | + | 15487 - 16827 | 51177.4 |
| hypothetical protein | EKG39_00075 | Not Available | - | 16982 - 17326 | 13222.8 |
| transporter | EKG39_00080 | Not Available | - | 17721 - 18671 | 35573.6 |
| hypothetical protein | EKG39_00095 | Not Available | - | 20760 - 21095 | 12064.6 |
| nad(p)/fad-dependent oxidoreductase | EKG39_00100 | Not Available | - | 21624 - 22892 | 46235.8 |
| proline racemase | EKG39_00105 | Not Available | - | 23107 - 24147 | 38077.5 |
| Ncrna_class:other | Not Available | Not Available | + | 24301 - 24482 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | EKG39_00110 | Not Available | + | 24330 - 25244 | 34170.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
