Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella atlantica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 5 |
| Temperature range | psychrophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella atlantica strain HAW-EB5
Accession NumberRXNV00000000.1
Gene Summary
Adenine Count
1494847 bp
Thymine Count
1426199 bp
Guanine Count
1189223 bp
Cytosine Count
1282213 bp
Genome Length
5394979 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methylcrotonyl-coa carboxylase | EKG39_01765 | Not Available | + | 438041 - 438184 | 4983.83 |
| hydroxymethylglutaryl-coa lyase | EKG39_01770 | Not Available | + | 438184 - 439074 | 31182.4 |
| coa transferase subunit a | EKG39_01775 | Not Available | + | 439088 - 439801 | 25268.6 |
| coa transferase subunit b | EKG39_01780 | Not Available | + | 439818 - 440474 | 23265.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | EKG39_01785 | Not Available | + | 440861 - 441466 | 22007.1 |
| hypothetical protein | EKG39_01795 | Not Available | + | 441851 - 442288 | 16393.6 |
| thymidine kinase | EKG39_01800 | Not Available | - | 442410 - 442988 | 21669.8 |
| m3 family peptidase | EKG39_01805 | Not Available | + | 443275 - 445428 | 80292.9 |
| na+/h+ antiporter nhac family protein | EKG39_01810 | Not Available | - | 445534 - 447099 | 55173.5 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EKG39_01815 | Not Available | - | 447558 - 448481 | 31543.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
